org-rw/org_rw/org_rw.py
2022-11-15 21:07:36 +01:00

2293 lines
73 KiB
Python

from __future__ import annotations
import collections
import difflib
import logging
import os
import re
import sys
from datetime import date, datetime, timedelta
from enum import Enum
from typing import Generator, List, Optional, Tuple, Union
from . import dom
DEBUG_DIFF_CONTEXT = 10
BASE_ENVIRONMENT = {
"org-footnote-section": "Footnotes",
"org-options-keywords": (
"ARCHIVE:",
"AUTHOR:",
"BIND:",
"CATEGORY:",
"COLUMNS:",
"CREATOR:",
"DATE:",
"DESCRIPTION:",
"DRAWERS:",
"EMAIL:",
"EXCLUDE_TAGS:",
"FILETAGS:",
"INCLUDE:",
"INDEX:",
"KEYWORDS:",
"LANGUAGE:",
"MACRO:",
"OPTIONS:",
"PROPERTY:",
"PRIORITIES:",
"SELECT_TAGS:",
"SEQ_TODO:",
"SETUPFILE:",
"STARTUP:",
"TAGS:" "TITLE:",
"TODO:",
"TYP_TODO:",
"SELECT_TAGS:",
"EXCLUDE_TAGS:",
),
}
DEFAULT_TODO_KEYWORDS = ["TODO"]
DEFAULT_DONE_KEYWORDS = ["DONE"]
HEADLINE_TAGS_RE = re.compile(r"((:(\w|[0-9_@#%])+)+:)\s*$")
HEADLINE_RE = re.compile(r"^(?P<stars>\*+)(?P<spacing>\s+)(?P<line>.*?)$")
KEYWORDS_RE = re.compile(
r"^(?P<indentation>\s*)#\+(?P<key>[^:\[]+)(\[(?P<options>[^\]]*)\])?:(?P<spacing>\s*)(?P<value>.*)$"
)
DRAWER_START_RE = re.compile(r"^(?P<indentation>\s*):([^:]+):(?P<end_indentation>\s*)$")
DRAWER_END_RE = re.compile(r"^(?P<indentation>\s*):END:(?P<end_indentation>\s*)$", re.I)
NODE_PROPERTIES_RE = re.compile(
r"^(?P<indentation>\s*):(?P<key>[^ ()+:]+)(?P<plus>\+)?:(?P<spacing>\s*)(?P<value>.+)$"
)
RAW_LINE_RE = re.compile(r"^\s*([^\s#:*|]|$)")
BASE_TIME_STAMP_RE = r"(?P<year>\d{4})-(?P<month>\d{2})-(?P<day>\d{2})( ?(?P<dow>[^ ]+))?( (?P<start_hour>\d{1,2}):(?P<start_minute>\d{1,2})(-+(?P<end_hour>\d{1,2}):(?P<end_minute>\d{1,2}))?)?(?P<repetition> (?P<rep_mark>(\+|\+\+|\.\+|-|--))(?P<rep_value>\d+)(?P<rep_unit>[hdwmy]))?"
CLEAN_TIME_STAMP_RE = r"\d{4}-\d{2}-\d{2}( ?([^ ]+))?( (\d{1,2}):(\d{1,2})(-+(\d{1,2}):(\d{1,2}))?)?( (\+|\+\+|\.\+|-|--)\d+[hdwmy])?"
ACTIVE_TIME_STAMP_RE = re.compile(r"<{}>".format(BASE_TIME_STAMP_RE))
INACTIVE_TIME_STAMP_RE = re.compile(r"\[{}\]".format(BASE_TIME_STAMP_RE))
PLANNING_RE = re.compile(
r"(?P<indentation>\s*)"
+ r"(SCHEDULED:\s*(?P<scheduled>[<\[]"
+ CLEAN_TIME_STAMP_RE
+ r"[>\]](--[<\[]"
+ CLEAN_TIME_STAMP_RE
+ r"[>\]])?)\s*"
+ r"|CLOSED:\s*(?P<closed>[<\[]"
+ CLEAN_TIME_STAMP_RE
+ r"[>\]](--[<\[]"
+ CLEAN_TIME_STAMP_RE
+ r"[>\]])?)\s*"
+ r"|DEADLINE:\s*(?P<deadline>[<\[]"
+ CLEAN_TIME_STAMP_RE
+ r"[>\]](--[<\[]"
+ CLEAN_TIME_STAMP_RE
+ r"[>\]])?)\s*"
r")+\s*"
)
LIST_ITEM_RE = re.compile(
r"(?P<indentation>\s*)((?P<bullet>[*\-+])|((?P<counter>\d|[a-zA-Z])(?P<counter_sep>[.)]))) ((?P<checkbox_indentation>\s*)\[(?P<checkbox_value>[ Xx])\])?((?P<tag_indentation>\s*)(?P<tag>.*?)::)?(?P<content>.*)"
)
# Org-Babel
BEGIN_BLOCK_RE = re.compile(r"^\s*#\+BEGIN_(?P<subtype>[^ ]+)(?P<arguments>.*)$", re.I)
END_BLOCK_RE = re.compile(r"^\s*#\+END_(?P<subtype>[^ ]+)\s*$", re.I)
RESULTS_DRAWER_RE = re.compile(r"^\s*:results:\s*$", re.I)
CodeSnippet = collections.namedtuple("CodeSnippet", ("name", "content", "result", "arguments"))
# Groupings
NON_FINISHED_GROUPS = (type(None), dom.ListGroupNode, dom.ResultsDrawerNode, dom.PropertyDrawerNode)
FREE_GROUPS = (dom.CodeBlock,)
class NonReproducibleDocument(Exception):
"""
Exception thrown when a document would be saved as different contents
from what it's loaded from.
"""
pass
def get_tokens(value):
if isinstance(value, Text):
return value.contents
if isinstance(value, RawLine):
return [value.line]
if isinstance(value, list):
return value
raise Exception("Unknown how to get tokens from: {}".format(value))
class RangeInRaw:
def __init__(self, content, start_token, end_token):
self._content = content
self._start_id = id(start_token)
self._end_id = id(end_token)
def update_range(self, new_contents):
contents = self._content
if isinstance(self._content, Text):
contents = self._content.contents
# Find start token
for start_idx, tok in enumerate(contents):
if id(tok) == self._start_id:
break
else:
raise Exception("Start token not found")
# Find end token
for offset, tok in enumerate(contents[start_idx:]):
if id(tok) == self._end_id:
break
else:
raise Exception("End token not found")
# Remove old contents
for i in range(1, offset):
contents.pop(start_idx + 1)
# Add new ones
for i, element in enumerate(new_contents):
contents.insert(start_idx + i + 1, element)
def get_links_from_content(content):
in_link = False
in_description = False
link_value = []
link_description = []
for i, tok in enumerate(get_tokens(content)):
if isinstance(tok, LinkToken):
if tok.tok_type == LinkTokenType.OPEN_LINK:
in_link = True
open_link_token = tok
elif tok.tok_type == LinkTokenType.OPEN_DESCRIPTION:
in_description = True
elif tok.tok_type == LinkTokenType.CLOSE:
rng = RangeInRaw(content, open_link_token, tok)
yield Link(
"".join(link_value),
"".join(link_description) if in_description else None,
rng,
)
in_link = False
in_description = False
link_value = []
link_description = []
elif isinstance(tok, str) and in_link:
if in_description:
link_description.append(tok)
else:
link_value.append(tok)
def text_to_dom(tokens, item):
if tokens is None:
return None
in_link = False
in_description = False
link_value = []
link_description = []
contents = []
for tok in tokens:
if isinstance(tok, LinkToken):
if tok.tok_type == LinkTokenType.OPEN_LINK:
in_link = True
open_link_token = tok
elif tok.tok_type == LinkTokenType.OPEN_DESCRIPTION:
in_description = True
elif tok.tok_type == LinkTokenType.CLOSE:
rng = RangeInRaw(item, open_link_token, tok)
contents.append(Link(
"".join(link_value),
"".join(link_description) if in_description else None,
rng,
))
in_link = False
in_description = False
link_value = []
link_description = []
elif isinstance(tok, str) and in_link:
if in_description:
link_description.append(tok)
else:
link_value.append(tok)
else:
contents.append(tok)
return contents
def get_line(item):
if isinstance(item, Text):
return item.linenum
elif isinstance(item, ListItem):
return item.linenum
elif isinstance(item, Property):
return item.linenum
elif isinstance(item, tuple):
return item[0]
else:
raise Exception("Unknown item type: {}".format(item))
class Headline:
def __init__(
self,
start_line,
depth,
orig,
properties,
keywords,
priority_start,
priority,
title_start,
title,
state,
tags_start,
tags,
contents,
children,
structural,
delimiters,
list_items,
table_rows,
parent,
is_todo,
is_done,
spacing,
):
self.start_line = start_line
self.depth = depth
self.orig = orig
self.properties = properties
self.keywords = keywords
self.priority_start = priority_start
self.priority = priority
self.title_start = title_start
self.title = parse_content_block(
[RawLine(linenum=start_line, line=title)]
)
self.state = state
self.tags_start = tags_start
self.shallow_tags = tags
self.contents = contents
self.children = children
self.structural = structural
self.delimiters = delimiters
self.list_items = list_items
self.table_rows = table_rows
self.parent = parent
self.is_todo = is_todo
self.is_done = is_done
self.scheduled = None
self.deadline = None
self.closed = None
self.spacing = spacing
# Read planning line
planning_line = self.get_element_in_line(start_line + 1)
# Ignore if not found or is a structural line
if planning_line is None or isinstance(planning_line, tuple):
return
if m := PLANNING_RE.match(planning_line.get_raw()):
self._planning_indendation = m.group("indentation")
self._planning_order = []
keywords = ["SCHEDULED", "CLOSED", "DEADLINE"]
plan = planning_line.get_raw().split("\n")[0]
indexes = [(kw, plan.find(kw)) for kw in keywords]
self._planning_order = [
kw
for (kw, idx) in sorted(
filter(lambda v: v[1] >= 0, indexes), key=lambda v: v[1]
)
]
if scheduled := m.group("scheduled"):
self.scheduled = parse_time(scheduled)
if closed := m.group("closed"):
self.closed = parse_time(closed)
if deadline := m.group("deadline"):
self.deadline = parse_time(deadline)
# Remove from contents
self._remove_element_in_line(start_line + 1)
@property
def doc(self):
par = self.parent
while isinstance(par, Headline):
par = par.parent
return par
def as_dom(self):
everything = (
self.keywords
+ self.contents
+ self.list_items
+ self.table_rows
+ self.properties
+ self.structural
+ self.delimiters
)
tree = []
current_node = None
indentation_tree = []
for line in sorted(everything, key=get_line):
if isinstance(current_node, dom.CodeBlock):
if (
isinstance(line, DelimiterLine)
and line.delimiter_type == DelimiterLineType.END_BLOCK
):
start = current_node.header.linenum
end = line.linenum
lines = self.get_lines_between(start + 1, end)
contents = "\n".join(lines)
if contents.endswith("\n"):
# This is not ideal, but to avoid having to do this maybe
# the content parsing must be re-thinked
contents = contents[:-1]
current_node.set_lines(contents)
tree.append(current_node)
current_node = None
else:
pass # Ignore
elif isinstance(line, Property):
if type(current_node) in NON_FINISHED_GROUPS:
current_node = dom.PropertyDrawerNode()
tree.append(current_node)
assert isinstance(current_node, dom.PropertyDrawerNode)
current_node.append(dom.PropertyNode(line.key, line.value))
elif isinstance(line, Text):
tree_up = list(indentation_tree)
while len(tree_up) > 0:
node = tree_up[-1]
if (isinstance(node, dom.BlockNode)
or isinstance(node, dom.DrawerNode)
):
node.append(dom.Text(line))
current_node = node
contents = []
break
elif ((not isinstance(node, dom.TableNode)) and
(type(node) not in NON_FINISHED_GROUPS)
):
raise NotImplementedError('Not implemented node type: {} (headline_id={}, line={}, doc={})'.format(
node,
self.id,
line.linenum,
self.doc.path,
))
else:
tree_up.pop(-1)
else:
current_node = None
contents = []
tree.append(dom.Text(text_to_dom(line.contents, line)))
indentation_tree = tree_up
elif isinstance(line, ListItem):
if (current_node is None
or isinstance(current_node, dom.TableNode)
or isinstance(current_node, dom.BlockNode)
or isinstance(current_node, dom.DrawerNode)
):
was_node = current_node
current_node = dom.ListGroupNode()
if was_node is None:
tree.append(current_node)
else:
was_node.append(current_node)
indentation_tree.append(current_node)
if not isinstance(current_node, dom.ListGroupNode):
if not isinstance(current_node, dom.ListGroupNode):
raise Exception("Expected a {}, found: {} on line {} on {}".format(dom.ListGroupNode, current_node, line.linenum, self.doc.path))
# This can happen. Frequently inside a LogDrawer
if len(indentation_tree) > 0 and (
(len(indentation_tree[-1].children) > 0)
and len(
[
c
for c in indentation_tree[-1].children
if isinstance(c, dom.ListItem)
][-1].orig.indentation
)
< len(line.indentation)
):
sublist = dom.ListGroupNode()
current_node.append(sublist)
current_node = sublist
indentation_tree.append(current_node)
while len(indentation_tree) > 0 and (
(len(indentation_tree[-1].children) > 0)
and len(
[
c
for c in indentation_tree[-1].children
if isinstance(c, dom.ListItem)
][-1].orig.indentation
)
> len(line.indentation)
):
rem = indentation_tree.pop(-1)
if len(indentation_tree) == 0:
indentation_tree.append(rem)
current_node = rem
break
else:
current_node = indentation_tree[-1]
node = dom.ListItem(text_to_dom(line.tag, line), text_to_dom(line.content, line), orig=line)
current_node.append(node)
elif isinstance(line, TableRow):
if current_node is None:
current_node = dom.TableNode()
tree.append(current_node)
# TODO: Allow indentation of this element inside others
indentation_tree = [current_node]
if not isinstance(current_node, dom.TableNode):
if not isinstance(current_node, dom.TableNode):
logging.warning("Expected a {}, found: {} on line {}".format(dom.TableNode, current_node, line.linenum))
# This can happen. Frequently inside a LogDrawer
if len(line.cells) > 0 and len(line.cells[0]) > 0 and line.cells[0][0] == '-':
node = dom.TableSeparatorRow(orig=line)
else:
node = dom.TableRow(line.cells, orig=line)
current_node.append(node)
elif (
isinstance(line, DelimiterLine)
and line.delimiter_type == DelimiterLineType.BEGIN_BLOCK
):
assert type(current_node) in NON_FINISHED_GROUPS
current_node = dom.CodeBlock(line, line.type_data.subtype)
elif isinstance(line, Keyword):
logging.warning("Keywords not implemented on `as_dom()`")
# elif (
# isinstance(line, DelimiterLine)
# and line.delimiter_type == DelimiterLineType.END_BLOCK
# ):
# assert isinstance(current_node, dom.BlockNode)
# current_node = None
elif (
isinstance(line, tuple)
and len(line) == 2
and isinstance(line[0], int)
and isinstance(line[1], str)
):
# Structural
(linenum, content) = line
if content.strip().upper() == ":PROPERTIES:":
assert current_node is None
current_node = dom.PropertyDrawerNode()
tree.append(current_node)
# TODO: Check if this can be nested
indentation_tree = [current_node]
elif content.strip().upper() == ":LOGBOOK:":
assert current_node is None
current_node = dom.LogbookDrawerNode()
tree.append(current_node)
# TODO: Check if this can be nested
indentation_tree = [current_node]
elif content.strip().upper() == ":END:":
if current_node is None and len(indentation_tree) == 0:
logging.error('Finished node (:END:) with no known starter')
else:
tree_up = list(indentation_tree)
while len(tree_up) > 0:
node = tree_up[-1]
if isinstance(node, dom.DrawerNode):
indentation_tree = tree_up
current_node = node
tree_up.pop(-1)
break
else:
tree_up.pop(-1)
else:
raise Exception('Unexpected node ({}) on headline (id={}), line {}'.format(current_node, self.id, linenum))
current_node = None
elif content.strip().upper() == ":RESULTS:":
assert current_node is None
current_node = dom.ResultsDrawerNode()
# TODO: Allow indentation of these blocks inside others
indentation_tree = [current_node]
tree.append(current_node)
else:
raise Exception("Unknown structural line: {}".format(line))
else:
raise Exception("Unknown node type: {}".format(line))
return tree
def get_lists(self):
lists = []
last_line = None
for li in self.list_items:
if last_line is None:
lists.append([li])
else:
num_lines = li.linenum - (last_line + 1)
lines_between = ''.join(['\n' + l
for l in self.get_lines_between(last_line + 1, li.linenum)]
)
# Only empty lines
if ((num_lines == lines_between.count('\n'))
and (len(lines_between.strip()) == 0)
):
lists[-1].append(li)
else:
lists.append([li])
last_line = li.linenum + sum(c.count('\n') for c in li.content)
return lists
# @DEPRECATED: use `get_lists`
def getLists(self):
return self.get_lists()
def get_tables(self):
tables = []
last_line = None
for row in self.table_rows:
if last_line == row.linenum - 1:
tables[-1].append(row)
else:
tables.append([row])
last_line = row.linenum
return tables
def get_planning_line(self):
if self.scheduled is None and self.closed is None and self.deadline is None:
return None
contents = [self._planning_indendation]
for el in self._planning_order:
if el == "SCHEDULED" and self.scheduled is not None:
contents.append("SCHEDULED: {} ".format(self.scheduled.to_raw()))
elif el == "CLOSED" and self.closed is not None:
contents.append("CLOSED: {} ".format(self.closed.to_raw()))
elif el == "DEADLINE" and self.deadline is not None:
contents.append("DEADLINE: {} ".format(self.deadline.to_raw()))
# Consider elements added (not present on planning order)
if ("SCHEDULED" not in self._planning_order) and (self.scheduled is not None):
contents.append("SCHEDULED: {} ".format(self.scheduled.to_raw()))
if ("CLOSED" not in self._planning_order) and (self.closed is not None):
contents.append("CLOSED: {} ".format(self.closed.to_raw()))
if ("DEADLINE" not in self._planning_order) and (self.deadline is not None):
contents.append("DEADLINE: {} ".format(self.deadline.to_raw()))
return "".join(contents).rstrip()
@property
def id(self):
return self.get_property("ID")
@id.setter
def id(self, value):
self.set_property("ID", value)
@property
def clock(self):
times = []
for chunk in self.contents:
for line in chunk.get_raw().split("\n"):
content = line.strip()
if not content.startswith("CLOCK:"):
continue
time_seg = content[len("CLOCK:") :].strip()
if "--" in time_seg:
# TODO: Consider duration
start, end = time_seg.split("=")[0].split("--")
as_time_range = parse_org_time_range(start, end)
parsed = as_time_range
else:
parsed = OrgTime.parse(time_seg)
times.append(parsed)
return times
@property
def tags(self):
if isinstance(self.parent, OrgDoc):
return list(self.shallow_tags)
else:
return list(self.shallow_tags) + self.parent.tags
def get_property(self, name: str, default=None):
for prop in self.properties:
if prop.key == name:
return prop.value
return default
def set_property(self, name: str, value: str):
for prop in self.properties:
# A matching property is found, update it
if prop.key == name:
prop.value = value
return
# No matching property found, add it
else:
if len(self.properties) > 0:
last_prop = self.properties[-1]
last_line = last_prop.linenum
last_match = last_prop.match
else:
self.structural.append(
(
-2, # Linenum
":PROPERTIES:",
)
)
self.structural.append(
(
0, # Linenum
":END:",
)
)
last_line = -1
last_match = None
self.properties.append(
Property(
linenum=last_line,
match=last_match,
key=name,
value=value,
options=None,
)
)
def get_links(self):
for content in self.contents:
yield from get_links_from_content(content)
for lst in self.get_lists():
for item in lst:
yield from get_links_from_content(item.content)
def get_lines_between(self, start, end):
for line in self.contents:
if start <= line.linenum < end:
text = []
for item in line.contents:
if isinstance(item, str):
text.append(item)
elif isinstance(item, MarkerType):
text.append(ModeToMarker[item])
yield "".join(text)
def get_contents(self, format):
if format == "raw":
yield from map(
lambda x: token_list_to_raw(x.contents),
sorted(self.contents, key=lambda x: x.linenum),
)
else:
raise NotImplementedError()
def get_element_in_line(self, linenum):
for line in self.contents:
if linenum == line.linenum:
return line
for (s_lnum, struc) in self.structural:
if linenum == s_lnum:
return ("structural", struc)
def _remove_element_in_line(self, linenum):
found = None
for i, line in enumerate(self.contents):
if linenum == line.linenum:
found = i
break
assert found is not None
el = self.contents[found]
assert isinstance(el, Text)
raw = el.get_raw()
if "\n" not in raw:
# Remove the element found
self.contents.pop(found)
else:
# Remove the first line
self.contents[found] = parse_content_block(
[RawLine(self.contents[found].linenum + 1, raw.split("\n", 1)[1])]
)
def get_structural_end_after(self, linenum):
for (s_lnum, struc) in self.structural:
if s_lnum > linenum and struc.strip().upper() == ":END:":
return (s_lnum, struc)
def get_code_snippets(self):
inside_code = False
sections = []
arguments = None
for delimiter in self.delimiters:
if delimiter.delimiter_type == DelimiterLineType.BEGIN_BLOCK and delimiter.type_data.subtype.lower() == "src":
line_start = delimiter.linenum
inside_code = True
arguments = delimiter.arguments
elif delimiter.delimiter_type == DelimiterLineType.END_BLOCK and delimiter.type_data.subtype.lower() == "src":
inside_code = False
start, end = line_start, delimiter.linenum
lines = self.get_lines_between(start + 1, end)
contents = "\n".join(lines)
if contents.endswith("\n"):
# This is not ideal, but to avoid having to do this maybe
# the content parsing must be re-thinked
contents = contents[:-1]
sections.append(
{
"line_first": start + 1,
"line_last": end - 1,
"content": contents,
"arguments": arguments,
}
)
arguments = None
line_start = None
for kword in self.keywords:
if kword.key.upper() == "RESULTS":
for snippet in sections:
if kword.linenum > snippet["line_last"]:
result_first = self.get_element_in_line(kword.linenum + 1)
if isinstance(result_first, Text):
result = "\n".join(result_first.contents)
snippet["result"] = result
if result.strip().startswith(": "):
# Split lines and remove ':'
lines = result.split("\n")
s_result = []
for line in lines:
if ": " not in line:
break
s_result.append(line.lstrip(" ")[2:])
snippet["result"] = "\n".join(s_result)
elif (
isinstance(result_first, tuple)
and len(result_first) == 2
and result_first[0] == "structural"
and result_first[1].strip().upper() == ":RESULTS:"
):
(end_line, _) = self.get_structural_end_after(
kword.linenum + 1
)
contents = "\n".join(
self.get_lines_between(kword.linenum + 1, end_line)
)
indentation = result_first[1].index(":")
dedented = "\n".join(
[line[indentation:] for line in contents.split("\n")]
)
if dedented.endswith("\n"):
dedented = dedented[:-1]
snippet["result"] = dedented
break
results = []
for section in sections:
name = None
content = section["content"]
code_result = section.get("result", None)
arguments = section.get("arguments", None)
results.append(CodeSnippet(name=name, content=content, result=code_result, arguments=arguments))
return results
RawLine = collections.namedtuple("RawLine", ("linenum", "line"))
Keyword = collections.namedtuple(
"Keyword", ("linenum", "match", "key", "value", "options")
)
Property = collections.namedtuple(
"Property", ("linenum", "match", "key", "value", "options")
)
class ListItem:
def __init__(self,
linenum, match,
indentation,
bullet, counter, counter_sep,
checkbox_indentation, checkbox_value,
tag_indentation, tag,
content,
):
self.linenum = linenum
self.match = match
self.indentation = indentation
self.bullet = bullet
self.counter = counter
self.counter_sep = counter_sep
self.checkbox_indentation = checkbox_indentation
self.checkbox_value = checkbox_value
self.tag_indentation = tag_indentation
self.tag = tag
self.content = content
@property
def text_start_pos(self):
return len(self.indentation) + 1 # Indentation + bullet
def append_line(self, line):
self.content += parse_content_block('\n' + line).contents
TableRow = collections.namedtuple(
"TableRow",
(
"linenum",
"indentation",
"suffix",
"last_cell_closed",
"cells",
),
)
# @TODO How are [YYYY-MM-DD HH:mm--HH:mm] and ([... HH:mm]--[... HH:mm]) differentiated ?
# @TODO Consider recurrence annotations
class Timestamp:
def __init__(self, active, year, month, day, dow, hour, minute, repetition=None):
self.active = active
self._year = year
self._month = month
self._day = day
self.dow = dow
self.hour = hour
self.minute = minute
self.repetition = repetition
def to_datetime(self) -> datetime:
if self.hour is not None:
return datetime(self.year, self.month, self.day, self.hour, self.minute)
else:
return datetime(self.year, self.month, self.day, 0, 0)
def __add__(self, delta: timedelta):
as_dt = self.to_datetime()
to_dt = as_dt + delta
return Timestamp(
self.active,
year=to_dt.year,
month=to_dt.month,
day=to_dt.day,
dow=None,
hour=to_dt.hour if self.hour is not None or to_dt.hour != 0 else None,
minute=to_dt.minute
if self.minute is not None or to_dt.minute != 0
else None,
repetition=self.repetition,
)
def __eq__(self, other):
if not isinstance(other, Timestamp):
return False
return (
(self.active == other.active)
and (self.year == other.year)
and (self.month == other.month)
and (self.day == other.day)
and (self.dow == other.dow)
and (self.hour == other.hour)
and (self.minute == other.minute)
and (self.repetition == other.repetition)
)
def __lt__(self, other):
if not isinstance(other, Timestamp):
return False
return self.to_datetime() < other.to_datetime()
def __gt__(self, other):
if not isinstance(other, Timestamp):
return False
return self.to_datetime() > other.to_datetime()
def __repr__(self):
return timestamp_to_string(self)
# Properties whose modification changes the Day-Of-Week
@property
def year(self):
return self._year
@year.setter
def year(self, value):
self._year = value
self.dow = None
@property
def month(self):
return self._month
@month.setter
def month(self, value):
self._month = value
self.dow = None
@property
def day(self):
return self._day
@day.setter
def day(self, value):
self._day = value
self.dow = None
class DelimiterLineType(Enum):
BEGIN_BLOCK = 1
END_BLOCK = 2
BlockDelimiterTypeData = collections.namedtuple(
"BlockDelimiterTypeData", ("subtype")
)
DelimiterLine = collections.namedtuple(
"DelimiterLine", ("linenum", "line", "delimiter_type", "type_data", "arguments")
)
class MarkerType(Enum):
NO_MODE = 0b0
BOLD_MODE = 0b1
CODE_MODE = 0b10
ITALIC_MODE = 0b100
STRIKE_MODE = 0b1000
UNDERLINED_MODE = 0b10000
VERBATIM_MODE = 0b100000
MARKERS = {
"*": MarkerType.BOLD_MODE,
"~": MarkerType.CODE_MODE,
"/": MarkerType.ITALIC_MODE,
"+": MarkerType.STRIKE_MODE,
"_": MarkerType.UNDERLINED_MODE,
"=": MarkerType.VERBATIM_MODE,
}
ModeToMarker = {}
for tok, mode in MARKERS.items():
ModeToMarker[mode] = tok
MarkerToken = collections.namedtuple("MarkerToken", ("closing", "tok_type"))
LinkToken = collections.namedtuple("LinkToken", ("tok_type"))
class LinkTokenType(Enum):
OPEN_LINK = 3
OPEN_DESCRIPTION = 5
CLOSE = 4
BEGIN_PROPERTIES = "OPEN_PROPERTIES"
END_PROPERTIES = "CLOSE_PROPERTIES"
def token_from_type(tok_type):
return ModeToMarker[tok_type]
class TimeRange:
def __init__(self, start_time: OrgTime, end_time: OrgTime):
self.start_time = start_time
self.end_time = end_time
def to_raw(self) -> str:
return timerange_to_string(self)
@property
def duration(self) -> timedelta:
delta = self.end - self.start
return delta
@property
def start(self) -> datetime:
return self.start_time.time.to_datetime()
@property
def end(self) -> datetime:
return self.end_time.time.to_datetime()
def parse_time(value: str) -> Union[None, TimeRange, OrgTime]:
if (value.count(">--<") == 1) or (value.count("]--[") == 1):
# Time ranges with two different dates
# @TODO properly consider "=> DURATION" section
start, end = value.split("=")[0].split("--")
as_time_range = parse_org_time_range(start, end)
if (as_time_range.start_time is not None) and (
as_time_range.end_time is not None
):
return as_time_range
else:
raise Exception("Unknown time range format: {}".format(value))
elif as_time := OrgTime.parse(value):
return as_time
else:
return None
def parse_org_time_range(start, end) -> TimeRange:
return TimeRange(OrgTime.parse(start), OrgTime.parse(end))
class OrgTime:
def __init__(self, ts: Timestamp, end_time: Optional[Timestamp] = None):
assert ts is not None
self.time = ts
self.end_time = end_time
@property
def repetition(self):
return self.time.repetition
@property
def duration(self):
if self.end_time is None:
return timedelta() # No duration
else:
return self.end_time.to_datetime() - self.time.to_datetime()
def to_raw(self):
return timestamp_to_string(self.time, self.end_time)
def __repr__(self):
return f"OrgTime({self.to_raw()})"
@classmethod
def parse(self, value: str) -> OrgTime:
if m := ACTIVE_TIME_STAMP_RE.match(value):
active = True
elif m := INACTIVE_TIME_STAMP_RE.match(value):
active = False
else:
return None
repetition = None
if m.group("repetition"):
repetition = m.group("repetition").strip()
if m.group("end_hour"):
return OrgTime(
Timestamp(
active,
int(m.group("year")),
int(m.group("month")),
int(m.group("day")),
m.group("dow"),
int(m.group("start_hour")),
int(m.group("start_minute")),
repetition=repetition,
),
Timestamp(
active,
int(m.group("year")),
int(m.group("month")),
int(m.group("day")),
m.group("dow"),
int(m.group("end_hour")),
int(m.group("end_minute")),
),
)
return OrgTime(
Timestamp(
active,
int(m.group("year")),
int(m.group("month")),
int(m.group("day")),
m.group("dow"),
int(m.group("start_hour")) if m.group("start_hour") else None,
int(m.group("start_minute")) if m.group("start_minute") else None,
repetition=repetition,
)
)
def time_from_str(s: str) -> OrgTime:
return OrgTime.parse(s)
def timerange_to_string(tr: TimeRange):
return tr.start_time.to_raw() + "--" + tr.end_time.to_raw()
def timestamp_to_string(ts: Timestamp, end_time: Optional[Timestamp] = None) -> str:
date = "{year}-{month:02d}-{day:02d}".format(
year=ts.year, month=ts.month, day=ts.day
)
if ts.dow:
date = date + " " + ts.dow
if ts.hour is not None:
base = "{date} {hour:02}:{minute:02d}".format(
date=date, hour=ts.hour, minute=ts.minute
)
else:
base = date
if end_time is not None:
assert end_time.hour is not None
assert end_time.minute is not None
base = "{base}-{hour:02}:{minute:02d}".format(
base=base, hour=end_time.hour, minute=end_time.minute
)
if ts.repetition is not None:
base = base + " " + ts.repetition
if ts.active:
return "<{}>".format(base)
else:
return "[{}]".format(base)
def get_raw(doc):
if isinstance(doc, str):
return doc
else:
return doc.get_raw()
class Line:
def __init__(self, linenum, contents):
self.linenum = linenum
self.contents = contents
def get_raw(self):
rawchunks = []
for chunk in self.contents:
if isinstance(chunk, str):
rawchunks.append(chunk)
else:
rawchunks.append(chunk.get_raw())
return "".join(rawchunks) + "\n"
class Link:
def __init__(self, value: str, description: str, origin: RangeInRaw):
self._value = value
self._description = description
self._origin = origin
def get_raw(self):
if self.description:
return "[[{}][{}]]".format(self.value, self.description)
else:
return "[[{}]]".format(self.value)
def _update_content(self):
new_contents = []
new_contents.append(self._value)
if self._description:
new_contents.append(LinkToken(LinkTokenType.OPEN_DESCRIPTION))
new_contents.append(self._description)
self._origin.update_range(new_contents)
@property
def value(self):
return self._value
@value.setter
def value(self, new_value):
self._value = new_value
self._update_content()
@property
def description(self):
return self._description
@description.setter
def description(self, new_description):
self._description = new_description
self._update_content()
class Text:
def __init__(self, contents, line):
self.contents = contents
self.linenum = line
def __repr__(self):
return "{{Text line: {}; content: {} }}".format(self.linenum, self.contents)
def get_text(self):
return token_list_to_plaintext(self.contents)
def get_raw(self):
return token_list_to_raw(self.contents)
def token_list_to_plaintext(tok_list) -> str:
contents = []
in_link = False
in_description = False
link_description = []
link_url = []
for chunk in tok_list:
if isinstance(chunk, str):
if not in_link:
contents.append(chunk)
elif in_description:
link_description.append(chunk)
else:
link_url.append(chunk)
elif isinstance(chunk, LinkToken):
if chunk.tok_type == LinkTokenType.OPEN_LINK:
in_link = True
elif chunk.tok_type == LinkTokenType.OPEN_DESCRIPTION:
in_description = True
else:
assert chunk.tok_type == LinkTokenType.CLOSE
if not in_description:
# This might happen when link doesn't have a separate description
link_description = link_url
contents.append(''.join(link_description))
in_link = False
in_description = False
link_description = []
link_url = []
else:
assert isinstance(chunk, MarkerToken)
return "".join(contents)
def token_list_to_raw(tok_list):
contents = []
for chunk in tok_list:
if isinstance(chunk, str):
contents.append(chunk)
elif isinstance(chunk, LinkToken):
if chunk.tok_type == LinkTokenType.OPEN_LINK:
contents.append("[[")
elif chunk.tok_type == LinkTokenType.OPEN_DESCRIPTION:
contents.append("][")
else:
assert chunk.tok_type == LinkTokenType.CLOSE
contents.append("]]")
else:
assert isinstance(chunk, MarkerToken)
contents.append(token_from_type(chunk.tok_type))
return "".join(contents)
class Bold:
Marker = "*"
def __init__(self, contents, line):
self.contents = contents
def get_raw(self):
raw = "".join(map(get_raw, self.contents))
return f"{self.Marker}{raw}{self.Marker}"
class Code:
Marker = "~"
def __init__(self, contents, line):
self.contents = contents
def get_raw(self):
raw = "".join(map(get_raw, self.contents))
return f"{self.Marker}{raw}{self.Marker}"
class Italic:
Marker = "/"
def __init__(self, contents, line):
self.contents = contents
def get_raw(self):
raw = "".join(map(get_raw, self.contents))
return f"{self.Marker}{raw}{self.Marker}"
class Strike:
Marker = "+"
def __init__(self, contents, line):
self.contents = contents
def get_raw(self):
raw = "".join(map(get_raw, self.contents))
return f"{self.Marker}{raw}{self.Marker}"
class Underlined:
Marker = "_"
def __init__(self, contents, line):
self.contents = contents
def get_raw(self):
raw = "".join(map(get_raw, self.contents))
return f"{self.Marker}{raw}{self.Marker}"
class Verbatim:
Marker = "="
def __init__(self, contents, line):
self.contents = contents
def get_raw(self):
raw = "".join(map(get_raw, self.contents))
return f"{self.Marker}{raw}{self.Marker}"
def is_pre(char: str) -> bool:
if isinstance(char, str):
return char in "\n\r\t -({'\""
else:
return True
def is_marker(char: str) -> bool:
if isinstance(char, str):
return char in "*=/+_~"
else:
return False
def is_border(char: str) -> bool:
if isinstance(char, str):
return char not in "\n\r\t "
else:
return False
def is_body(char: str) -> bool:
if isinstance(char, str):
return True
else:
return False
def is_post(char: str) -> bool:
if isinstance(char, str):
return char in "-.,;:!?')}[\""
else:
return False
TOKEN_TYPE_TEXT = 0
TOKEN_TYPE_OPEN_MARKER = 1
TOKEN_TYPE_CLOSE_MARKER = 2
TOKEN_TYPE_OPEN_LINK = 3
TOKEN_TYPE_CLOSE_LINK = 4
TOKEN_TYPE_OPEN_DESCRIPTION = 5
def tokenize_contents(contents: str):
tokens = []
last_char = None
text = []
closes = set()
in_link = False
in_link_description = False
last_link_start = 0
def cut_string():
nonlocal text
nonlocal tokens
if len(text) > 0:
tokens.append((TOKEN_TYPE_TEXT, "".join(text)))
text = []
cursor = enumerate(contents)
for i, char in cursor:
has_changed = False
# Possible link opening
if char == "[":
if (
len(contents) > i + 3
# At least 3 characters more to open and close a link
and contents[i + 1] == "["
# TODO: Generalize this to a backtracking, don't just fix the test case...
and contents[i + 2] != "["
):
close = contents.find("]]", i)
if close != -1:
# Link with no description
cut_string()
in_link = True
tokens.append((TOKEN_TYPE_OPEN_LINK, None))
assert "[" == (next(cursor)[1])
last_link_start = i
continue
if close != -1 and contents[close + 1] == "[":
# Link with description?
close = contents.find("]", close + 1)
if close != -1 and contents[close + 1] == "]":
# No match here means this is not an Org link
cut_string()
in_link = True
tokens.append((TOKEN_TYPE_OPEN_LINK, None))
assert "[" == (next(cursor)[1])
last_link_start = i
continue
# Possible link close or open of description
if char == "]" and len(contents) > i + 1 and in_link:
if contents[i + 1] == "]":
cut_string()
tokens.append((TOKEN_TYPE_CLOSE_LINK, None))
assert "]" == (next(cursor)[1])
in_link = False
in_link_description = False
continue
elif contents[i + 1] == "[":
cut_string()
tokens.append((TOKEN_TYPE_OPEN_DESCRIPTION, None))
assert "[" == (next(cursor)[1])
continue
if in_link and not in_link_description:
# Link's pointer have no formatting
pass
elif (
(i not in closes)
and is_marker(char)
and is_pre(last_char)
and ((i + 1 < len(contents)) and is_border(contents[i + 1]))
):
is_valid_mark = False
# Check that is closed later
text_in_line = True
for j in range(i, len(contents) - 1):
if contents[j] == "\n":
if not text_in_line:
break
text_in_line = False
elif is_border(contents[j]) and contents[j + 1] == char:
is_valid_mark = True
closes.add(j + 1)
break
else:
text_in_line |= is_body(contents[j])
if is_valid_mark:
cut_string()
tokens.append((TOKEN_TYPE_OPEN_MARKER, char))
has_changed = True
elif i in closes:
cut_string()
tokens.append((TOKEN_TYPE_CLOSE_MARKER, char))
has_changed = True
if not has_changed:
text.append(char)
last_char = char
if len(text) > 0:
tokens.append((TOKEN_TYPE_TEXT, "".join(text)))
return tokens
def parse_contents(raw_contents: List[RawLine]):
if len(raw_contents) == 0:
return []
blocks = []
current_block = []
for line in raw_contents:
if len(current_block) == 0:
# Seed the first block
current_line = line.linenum
current_block.append(line)
else:
if line.linenum == current_line + 1:
# Continue with the current block
current_line = line.linenum
current_block.append(line)
else:
# Split the blocks
blocks.append(current_block)
current_line = line.linenum
current_block = [line]
# Check that the current block is not left behind
if len(current_block) > 0:
blocks.append(current_block)
return [parse_content_block(block) for block in blocks]
def parse_content_block(raw_contents: Union[List[RawLine],str]):
contents_buff = []
if isinstance(raw_contents, str):
contents_buff.append(raw_contents)
else:
for line in raw_contents:
contents_buff.append(line.line)
contents = "\n".join(contents_buff)
tokens = tokenize_contents(contents)
if isinstance(raw_contents, str):
current_line = None
else:
current_line = raw_contents[0].linenum
contents = []
# Use tokens to tag chunks of text with it's container type
for (tok_type, tok_val) in tokens:
if tok_type == TOKEN_TYPE_TEXT:
contents.append(tok_val)
elif tok_type == TOKEN_TYPE_OPEN_MARKER:
contents.append(MarkerToken(False, MARKERS[tok_val]))
elif tok_type == TOKEN_TYPE_CLOSE_MARKER:
contents.append(MarkerToken(True, MARKERS[tok_val]))
elif tok_type == TOKEN_TYPE_OPEN_LINK:
contents.append(LinkToken(LinkTokenType.OPEN_LINK))
elif tok_type == TOKEN_TYPE_OPEN_DESCRIPTION:
contents.append(LinkToken(LinkTokenType.OPEN_DESCRIPTION))
elif tok_type == TOKEN_TYPE_CLOSE_LINK:
contents.append(LinkToken(LinkTokenType.CLOSE))
return Text(contents, current_line)
def dump_contents(raw):
if isinstance(raw, RawLine):
return (raw.linenum, raw.line)
elif isinstance(raw, ListItem):
bullet = raw.bullet if raw.bullet else raw.counter + raw.counter_sep
content_full = token_list_to_raw(raw.content)
content_lines = content_full.split('\n')
content = '\n'.join(content_lines)
checkbox = f"[{raw.checkbox_value}]" if raw.checkbox_value else ""
tag = f"{raw.tag_indentation}{token_list_to_raw(raw.tag or '')}::" if raw.tag or raw.tag_indentation else ""
return (
raw.linenum,
f"{raw.indentation}{bullet} {checkbox}{tag}{content}",
)
elif isinstance(raw, TableRow):
closed = '|' if raw.last_cell_closed else ''
return (
raw.linenum,
f"{' ' * raw.indentation}|{'|'.join(raw.cells)}{closed}{raw.suffix}",
)
return (raw.linenum, raw.get_raw())
def parse_headline(hl, doc, parent) -> Headline:
stars = hl["orig"].group("stars")
depth = len(stars)
spacing = hl["orig"].group("spacing")
# TODO: Parse line for priority, cookies and tags
line = hl["orig"].group("line")
hl_tags = HEADLINE_TAGS_RE.search(line)
if hl_tags is None:
tags = []
else:
tags = hl_tags.group(0)[1:-1].split(":")
line = HEADLINE_TAGS_RE.sub("", line)
hl_state = None
title = line
is_done = is_todo = False
for state in doc.todo_keywords or []:
if title.startswith(state + " "):
hl_state = state
title = title[len(state + " ") :]
is_todo = True
break
else:
for state in doc.done_keywords or []:
if title.startswith(state + " "):
hl_state = state
title = title[len(state + " ") :]
is_done = True
break
contents = parse_contents(hl["contents"])
if not (isinstance(parent, OrgDoc) or depth > parent.depth):
raise AssertionError("Incorrectly parsed parent on `{}' > `{}'".format(parent.title, title))
headline = Headline(
start_line=hl["linenum"],
depth=depth,
orig=hl["orig"],
title=title,
state=hl_state,
contents=contents,
children=None,
keywords=hl["keywords"],
properties=hl["properties"],
structural=hl["structural"],
delimiters=hl["delimiters"],
list_items=hl["list_items"],
table_rows=hl["table_rows"],
title_start=None,
priority=None,
priority_start=None,
tags_start=None,
tags=tags,
parent=parent,
is_todo=is_todo,
is_done=is_done,
spacing=spacing,
)
headline.children = [
parse_headline(child, doc, headline) for child in hl["children"]
]
return headline
def dump_kw(kw):
options = kw.match.group("options")
if not options:
options = ""
return (
kw.linenum,
"{indentation}#+{key}{options}:{spacing}{value}".format(
indentation=kw.match.group("indentation"),
key=kw.key,
options=kw.options,
spacing=kw.match.group("spacing"),
value=kw.value,
),
)
def dump_property(prop: Property):
plus = ""
indentation = ""
spacing = " "
if prop.match is not None:
plus = prop.match.group("plus")
if plus is None:
plus = ""
indentation = prop.match.group("indentation")
spacing = prop.match.group("spacing")
if isinstance(prop.value, TimeRange):
value = timerange_to_string(prop.value)
elif isinstance(prop.value, OrgTime):
value = prop.value.to_raw()
else:
value = prop.value
return (
prop.linenum,
"{indentation}:{key}{plus}:{spacing}{value}".format(
indentation=indentation,
key=prop.key,
plus=plus,
spacing=spacing,
value=value,
),
)
def dump_structural(structural: Tuple):
return (structural[0], structural[1])
def dump_delimiters(line: DelimiterLine):
return (line.linenum, line.line)
class OrgDoc:
def __init__(
self, headlines, keywords, contents, list_items, structural, properties
):
self.todo_keywords = DEFAULT_TODO_KEYWORDS
self.done_keywords = DEFAULT_DONE_KEYWORDS
for keyword in keywords:
if keyword.key in ("TODO", "SEQ_TODO"):
todo_kws, done_kws = re.sub(r"\(.\)", "", keyword.value).split("|", 1)
self.todo_keywords = re.sub(r"\s{2,}", " ", todo_kws.strip()).split()
self.done_keywords = re.sub(r"\s{2,}", " ", done_kws.strip()).split()
self.keywords: List[Property] = keywords
self.contents: List[RawLine] = contents
self.list_items: List[ListItem] = list_items
self.structural: List = structural
self.properties: List = properties
self._path = None
self.headlines: List[Headline] = list(
map(lambda hl: parse_headline(hl, self, self), headlines)
)
@property
def id(self):
"""
Created by org-roam v2.
"""
for p in self.properties:
if p.key == 'ID':
return p.value
return None
@property
def path(self):
return self._path
## Querying
def get_links(self):
for headline in self.headlines:
yield from headline.get_links()
for content in self.contents:
yield from get_links_from_content(content)
def get_keywords(self, name: str, default=None):
for prop in self.keywords:
if prop.key == name:
return prop.value
return default
def get_property(self, name: str, default=None):
for prop in self.properties:
if prop.key == name:
return prop.value
return default
def getProperties(self):
return self.keywords
def getTopHeadlines(self):
return self.headlines
def getAllHeadlines(self) -> Generator[Headline]:
todo = self.headlines[::-1] # We go backwards, to pop/append and go depth-first
while len(todo) != 0:
hl = todo.pop()
todo.extend(hl.children[::-1])
yield hl
def get_code_snippets(self):
for headline in self.headlines:
yield from headline.get_code_snippets()
# Writing
def dump_headline(self, headline, recursive=True):
tags = ""
if len(headline.shallow_tags) > 0:
tags = ":" + ":".join(headline.shallow_tags) + ":"
state = ""
if headline.state:
state = headline.state + " "
yield "*" * headline.depth + headline.spacing + state + token_list_to_raw(headline.title.contents) + tags
planning = headline.get_planning_line()
if planning is not None:
yield planning
lines = []
KW_T = 0
CONTENT_T = 1
PROPERTIES_T = 2
STRUCTURAL_T = 3
for keyword in headline.keywords:
lines.append((KW_T, dump_kw(keyword)))
for content in headline.contents:
lines.append((CONTENT_T, dump_contents(content)))
for li in headline.list_items:
lines.append((CONTENT_T, dump_contents(li)))
for row in headline.table_rows:
lines.append((CONTENT_T, dump_contents(row)))
for prop in headline.properties:
lines.append((PROPERTIES_T, dump_property(prop)))
for struct in headline.structural:
lines.append((STRUCTURAL_T, dump_structural(struct)))
for content in headline.delimiters:
lines.append((STRUCTURAL_T, dump_delimiters(content)))
lines = sorted(lines, key=lambda x: x[1][0])
structured_lines = []
last_type = None
for i, line in enumerate(lines):
ltype = line[0]
content = line[1][1]
content = content + "\n"
last_type = ltype
structured_lines.append(content)
if last_type == PROPERTIES_T:
# No structural closing
indentation = 0
if len(lines) > 0:
last_line = lines[i - 1][1][1]
indentation = last_line.index(":")
structured_lines.append(" " * indentation + ":END:\n")
logging.warning(
"Added structural:{}: {}".format(
line[1][0], structured_lines[-1].strip()
)
)
if len(structured_lines) > 0:
content = "".join(structured_lines)
# Remove the last line jump, which will be accounted for by the "yield operation"
assert content.endswith("\n")
content = content[:-1]
yield content
if recursive:
for child in headline.children:
yield from self.dump_headline(child, recursive=recursive)
def dump(self):
lines = []
for prop in self.properties:
lines.append(dump_property(prop))
for struct in self.structural:
lines.append(dump_structural(struct))
for kw in self.keywords:
lines.append(dump_kw(kw))
for line in self.contents:
lines.append(dump_contents(line))
for li in self.list_items:
lines.append(dump_contents(li))
yield from map(lambda x: x[1], sorted(lines, key=lambda x: x[0]))
for headline in self.headlines:
yield from self.dump_headline(headline)
class OrgDocReader:
def __init__(self):
self.headlines: List[Headline] = []
self.keywords: List[Property] = []
self.headline_hierarchy: List[OrgDoc] = []
self.contents: List[RawLine] = []
self.delimiters: List[DelimiterLine] = []
self.list_items: List[ListItem] = []
self.table_rows: List[TableRow] = []
self.structural: List = []
self.properties: List = []
def finalize(self):
return OrgDoc(
self.headlines,
self.keywords,
self.contents,
self.list_items,
self.structural,
self.properties,
)
## Construction
def add_headline(self, linenum: int, match: re.Match) -> int:
# Position reader on the proper headline
stars = match.group("stars")
depth = len(stars)
headline = {
"linenum": linenum,
"orig": match,
"title": match.group("line"),
"contents": [],
"children": [],
"keywords": [],
"properties": [],
"logbook": [],
"structural": [],
"delimiters": [],
"results": [], # TODO: Move to each specific code block?
"list_items": [],
"table_rows": [],
}
while (depth - 1) > len(self.headline_hierarchy):
# Introduce structural headlines
self.headline_hierarchy.append(None)
while depth <= len(self.headline_hierarchy):
self.headline_hierarchy.pop()
if depth == 1:
self.headlines.append(headline)
else:
parent_idx = len(self.headline_hierarchy) - 1
while self.headline_hierarchy[parent_idx] is None:
parent_idx -= 1
self.headline_hierarchy[parent_idx]["children"].append(headline)
self.headline_hierarchy.append(headline)
if all([hl is not None for hl in self.headline_hierarchy]):
if not ([ len(hl['orig'].group('stars')) for hl in self.headline_hierarchy ]
== list(range(1, len(self.headline_hierarchy) + 1))):
raise AssertionError('Error on Headline Hierarchy')
def add_list_item_line(self, linenum: int, match: re.Match) -> int:
li = ListItem(
linenum=linenum,
match=match,
indentation=match.group("indentation"),
bullet=match.group("bullet"),
counter=match.group("counter"),
counter_sep=match.group("counter_sep"),
checkbox_indentation=match.group("checkbox_indentation"),
checkbox_value=match.group("checkbox_value"),
tag_indentation=match.group("tag_indentation"),
tag=parse_content_block(
[RawLine(linenum=linenum, line=match.group("tag"))]
).contents if match.group("tag") else None,
content=parse_content_block(
[RawLine(linenum=linenum, line=match.group("content"))]
).contents,
)
if len(self.headline_hierarchy) == 0:
self.list_items.append(li)
else:
self.headline_hierarchy[-1]["list_items"].append(li)
return li
def add_table_line(self, linenum: int, line: str) -> int:
chunks = line.split('|')
indentation = len(chunks[0])
if chunks[-1].strip() == '':
suffix = chunks[-1]
cells = chunks[1:-1]
last_cell_closed = True
else:
suffix = ''
cells = chunks[1:]
last_cell_closed = False
row = TableRow(
linenum,
indentation,
suffix,
last_cell_closed,
cells,
)
if len(self.headline_hierarchy) == 0:
self.table_rows.append(row)
else:
self.headline_hierarchy[-1]["table_rows"].append(row)
def add_keyword_line(self, linenum: int, match: re.Match) -> int:
options = match.group("options")
kw = Keyword(
linenum,
match,
match.group("key"),
match.group("value"),
options if options is not None else "",
)
if len(self.headline_hierarchy) == 0:
self.keywords.append(kw)
else:
self.headline_hierarchy[-1]["keywords"].append(kw)
def add_raw_line(self, linenum: int, line: str):
raw = RawLine(linenum, line)
if len(self.headline_hierarchy) == 0:
self.contents.append(raw)
else:
self.headline_hierarchy[-1]["contents"].append(raw)
def add_begin_block_line(self, linenum: int, match: re.Match):
line = DelimiterLine(linenum, match.group(0), DelimiterLineType.BEGIN_BLOCK,
BlockDelimiterTypeData(match.group("subtype")), match.group('arguments'))
if len(self.headline_hierarchy) == 0:
self.delimiters.append(line)
else:
self.headline_hierarchy[-1]["delimiters"].append(line)
def add_end_block_line(self, linenum: int, match: re.Match):
line = DelimiterLine(linenum, match.group(0), DelimiterLineType.END_BLOCK,
BlockDelimiterTypeData(match.group("subtype")), None)
if len(self.headline_hierarchy) == 0:
self.delimiters.append(line)
else:
self.headline_hierarchy[-1]["delimiters"].append(line)
def add_property_drawer_line(self, linenum: int, line: str, match: re.Match):
if len(self.headline_hierarchy) == 0:
self.current_drawer = self.properties
self.structural.append((linenum, line))
else:
self.current_drawer = self.headline_hierarchy[-1]["properties"]
self.headline_hierarchy[-1]["structural"].append((linenum, line))
def add_results_drawer_line(self, linenum: int, line: str, match: re.Match):
self.current_drawer = self.headline_hierarchy[-1]["results"]
self.headline_hierarchy[-1]["structural"].append((linenum, line))
def add_logbook_drawer_line(self, linenum: int, line: str, match: re.Match):
self.current_drawer = self.headline_hierarchy[-1]["logbook"]
self.headline_hierarchy[-1]["structural"].append((linenum, line))
def add_drawer_end_line(self, linenum: int, line: str, match: re.Match):
self.current_drawer = None
if len(self.headline_hierarchy) == 0:
self.structural.append((linenum, line))
else:
self.headline_hierarchy[-1]["structural"].append((linenum, line))
def add_node_properties_line(self, linenum: int, match: re.Match) -> int:
key = match.group("key")
value = match.group("value").strip()
if as_time := parse_time(value):
value = as_time
try:
self.current_drawer.append(Property(linenum, match, key, value, None))
except Exception:
if "current_drawer" not in dir(self): # Throw a better error on this case
raise Exception(
"Found properties before :PROPERTIES: line. Error on Org file?"
)
else:
raise # Let the exception pass
def read(self, s, environment):
lines = s.split("\n")
line_count = len(lines)
reader = enumerate(lines)
in_drawer = False
in_block = False
list_item_indentation = None
list_item = None
def add_raw_line_with_possible_indentation(linenum, line):
added = False
nonlocal list_item
nonlocal list_item_indentation
if list_item:
if ((line[:list_item.text_start_pos].strip() == '')
or (len(line.strip()) == 0)
):
list_item.append_line(line)
added = True
else:
list_item = None
list_item_indentation = None
if not added:
self.add_raw_line(linenum, line)
for lnum, line in reader:
linenum = lnum + 1
try:
if in_block:
if m := END_BLOCK_RE.match(line):
self.add_end_block_line(linenum, m)
in_block = False
list_item_indentation = None
list_item = None
else:
add_raw_line_with_possible_indentation(linenum, line)
elif m := HEADLINE_RE.match(line):
list_item_indentation = None
list_item = None
self.add_headline(linenum, m)
elif m := LIST_ITEM_RE.match(line):
list_item = self.add_list_item_line(linenum, m)
list_item_indentation = m.group("indentation")
elif m := RAW_LINE_RE.match(line):
add_raw_line_with_possible_indentation(linenum, line)
# Org-babel
elif m := BEGIN_BLOCK_RE.match(line):
self.add_begin_block_line(linenum, m)
in_block = True
list_item_indentation = None
list_item = None
elif m := END_BLOCK_RE.match(line):
self.add_end_block_line(linenum, m)
in_block = False
list_item_indentation = None
list_item = None
# Generic properties
elif m := KEYWORDS_RE.match(line):
self.add_keyword_line(linenum, m)
elif m := DRAWER_END_RE.match(line):
self.add_drawer_end_line(linenum, line, m)
in_drawer = False
list_item_indentation = None
list_item = None
elif (not in_drawer) and (m := DRAWER_START_RE.match(line)):
self.add_property_drawer_line(linenum, line, m)
in_drawer = True
list_item_indentation = None
list_item = None
elif (not in_drawer) and (m := RESULTS_DRAWER_RE.match(line)):
self.add_results_drawer_line(linenum, line, m)
in_drawer = True
list_item_indentation = None
list_item = None
elif m := NODE_PROPERTIES_RE.match(line):
self.add_node_properties_line(linenum, m)
elif line.strip().startswith('|'):
self.add_table_line(linenum, line)
list_item_indentation = None
list_item = None
# Not captured
else:
add_raw_line_with_possible_indentation(linenum, line)
except:
logging.error("Error line {}: {}".format(linenum + 1, line))
raise
def loads(s, environment=BASE_ENVIRONMENT, extra_cautious=True):
reader = OrgDocReader()
reader.read(s, environment)
doc = reader.finalize()
if extra_cautious: # Check that all options can be properly re-serialized
after_dump = dumps(doc)
if after_dump != s:
diff = list(
difflib.Differ().compare(
s.splitlines(keepends=True), after_dump.splitlines(keepends=True)
)
)
context_start = None
context_last_line = None
for i, line in enumerate(diff):
if not line.startswith(" "):
if context_start is None:
context_start = i
context_last_line = i
elif context_start:
if i > (context_last_line + DEBUG_DIFF_CONTEXT):
start = max(0, context_start - DEBUG_DIFF_CONTEXT)
end = min(len(diff), context_last_line + DEBUG_DIFF_CONTEXT)
print(
"## Lines {} to {}".format(start + 1, end + 1),
file=sys.stderr,
)
sys.stderr.writelines(diff[start:end])
context_start = None
context_last_line = None
# print("---\n" + after_dump + "\n---")
raise NonReproducibleDocument("Difference found between existing version and dumped")
return doc
def load(f, environment=BASE_ENVIRONMENT, extra_cautious=False):
doc = loads(f.read(), environment, extra_cautious)
doc._path = os.path.abspath(f.name)
return doc
def dumps(doc):
dump = list(doc.dump())
result = "\n".join(dump)
# print(result)
return result
def dump(doc, fp):
it = doc.dump()
# Write first line separately
line = next(it)
fp.write(line)
# Write following ones preceded by line jump
for line in it:
fp.write("\n" + line)